REVIEWED AGAINST EPA · USGS · CDC · NSF SOURCESINDEPENDENT · UPDATED JUNE 2026
Clear TapDrinking Water Reference
Water Safety & Contaminants

Chlorine and Disinfection Byproducts

Disinfection is the public health triumph behind modern tap water. It also creates a small trade-off: byproducts that form when chlorine reacts with natural organic matter. Here is how to weigh both sides.

Adding chlorine to drinking water is one of the most consequential public health measures of the last century. Before widespread disinfection, waterborne diseases like typhoid and cholera were common killers in American cities. Chlorination, and later other disinfectants, all but ended those epidemics. So the starting point for any discussion of chlorine is that it does enormous good.

Why we disinfect

Disinfectants kill or inactivate bacteria, viruses, and parasites in water, and they leave a residual that keeps protecting the water as it travels through miles of pipe to your home. That residual is why you can smell a faint chlorine odor at the tap. The protection it provides against waterborne pathogens vastly outweighs the downside, and removing it entirely would be dangerous.

How byproducts form

The trade-off is that chlorine reacts with natural organic matter in the source water, leaves, soil, and decaying vegetation, to form disinfection byproducts. The two main regulated groups are trihalomethanes (THMs), including chloroform, and haloacetic acids (HAA5). These form in tiny amounts, and their levels rise with more organic matter and longer time in the distribution system.

The health question

Long-term exposure to elevated disinfection byproducts has been associated in some studies with a modestly increased risk of bladder cancer and with possible reproductive effects, which is why they are regulated. The risks are small and tied to long-term exposure above the limits, not to a glass of chlorinated water. Public health authorities are clear that the benefits of disinfection far exceed the byproduct risk, and the goal is to keep both pathogens and byproducts low, not to choose one over the other.

The EPA limits

Disinfectant and byproduct limits
ItemEPA limit
Total trihalomethanes (TTHM)80 parts per billion
Haloacetic acids (HAA5)60 parts per billion
Chlorine (residual)4.0 mg/L maximum (MRDL)

Utilities monitor these and balance enough disinfectant to keep water safe with low enough byproduct formation to stay under the limits. You can find your system’s THM and HAA5 figures on its annual report, as covered in how to read your water quality report.

How to reduce them

If you dislike the taste or smell of chlorine, or want to lower byproducts in your drinking water, activated carbon is the simple answer; a carbon pitcher, faucet, or under-sink filter removes chlorine and reduces THMs effectively, as covered in activated carbon filters. Letting water stand or refrigerating it also lets some chlorine dissipate. One thing to avoid is removing the disinfectant residual from your whole system, since that protection matters; treat at the point of use for drinking water instead.

CT
THE CLEAR TAP EDITORIAL TEAM

We translate public drinking water data and regulation from the EPA, USGS, CDC, and NSF into clear, practical guidance for households across the United States.